Okay sorry I just got back to this I got the alarm hooked up. It was pretty much a no-brainer for that as the old alarm had the same identical wires is the new alarm and just really had to plug in the main harness and splice in the wires that were already there. The relays for the door locks were already in place so again it wasn't too difficult.
I'll go ahead and put my light probe on those wires down on the floorboard and see if they get any juice..
Yeah I like the idea that somebody may have shoved something under there broke them but they're pretty rough breaks..